Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.63■□□□□ 0.09
PIF1Q9H611 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.63■□□□□ 0.09
PIF1Q9H611 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.63■□□□□ 0.09
PIF1Q9H611 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.62■□□□□ 0.09
PIF1Q9H611 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 POU5F1P6-201ENST00000466990 990 ntBASIC15.62■□□□□ 0.09
PIF1Q9H611 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.62■□□□□ 0.09
PIF1Q9H611 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 AL356309.3-201ENST00000624132 1934 ntBASIC15.62■□□□□ 0.09
PIF1Q9H611 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.62■□□□□ 0.09
PIF1Q9H611 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PIF1Q9H611 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PIF1Q9H611 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PIF1Q9H611 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.61■□□□□ 0.09
PIF1Q9H611 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PIF1Q9H611 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.61■□□□□ 0.09
PIF1Q9H611 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 SLC25A6P2-201ENST00000497974 877 ntBASIC15.61■□□□□ 0.09
PIF1Q9H611 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 AC106795.1-205ENST00000512851 1056 ntBASIC15.61■□□□□ 0.09
PIF1Q9H611 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.61■□□□□ 0.09
PIF1Q9H611 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.61■□□□□ 0.09
PIF1Q9H611 MTDHP3-201ENST00000594186 672 ntBASIC15.61■□□□□ 0.09
PIF1Q9H611 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 AL589182.2-201ENST00000619332 1049 ntBASIC15.61■□□□□ 0.09
PIF1Q9H611 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PIF1Q9H611 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.61■□□□□ 0.09
PIF1Q9H611 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.61■□□□□ 0.09
PIF1Q9H611 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIF1Q9H611 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms