Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC106820.2-201ENST00000563775 3264 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 ERI2-201ENST00000300005 1479 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AP005212.1-201ENST00000581547 1997 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 PLK5-205ENST00000642079 1969 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 SNORA63C-201ENST00000364578 129 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 NCR2-203ENST00000373089 942 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 MTND3P17-201ENST00000416968 344 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 METTL8P1-201ENST00000428182 611 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 FAF2P1-201ENST00000429974 1298 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 MTND6P11-201ENST00000431890 483 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 HNRNPDP1-201ENST00000439535 754 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 RPL30P6-201ENST00000475925 342 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 OR5AK1P-201ENST00000524837 922 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 MT1B-202ENST00000562399 351 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 RN7SL279P-201ENST00000582185 284 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 MIR4795-201ENST00000584182 89 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC006504.6-201ENST00000590142 199 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC083899.3-201ENST00000603413 594 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC124303.1-201ENST00000605703 360 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AL844908.1-201ENST00000609953 652 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AL121873.1-201ENST00000616013 524 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC087239.1-201ENST00000622671 572 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AL049637.2-201ENST00000641778 930 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 GABARAPL3-202ENST00000624044 1851 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CREM-203ENST00000344351 1625 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC092162.3-201ENST00000624511 1624 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 AC073314.1-201ENST00000568729 2216 ntBASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-3Q9BYR6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 SPTLC1-202ENST00000337841 946 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
KRTAP3-3Q9BYR6 RNU6-331P-201ENST00000384724 107 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms