Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 HMGA1P7-201ENST00000406908 502 ntBASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 IGHV3-65-201ENST00000523210 341 ntBASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AC008667.4-201ENST00000607370 168 ntBASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AL121772.3-201ENST00000610840 674 ntBASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AC004790.2-201ENST00000623588 572 ntBASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHAMP1Q96JM3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.89■□□□□ 0.62
CHAMP1Q96JM3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHAMP1Q96JM3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHAMP1Q96JM3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 MIR648-201ENST00000385046 94 ntBASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 AC079776.4-201ENST00000511039 504 ntBASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 AC006557.2-201ENST00000592985 1240 ntBASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 PGM5P2-202ENST00000637225 1043 ntBASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHAMP1Q96JM3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC023157.3-201ENST00000619086 2088 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC136632.2-201ENST00000512891 861 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 OR7E14P-202ENST00000530490 1290 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AL160237.2-201ENST00000556165 472 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC020765.3-201ENST00000613051 740 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC117500.6-201ENST00000624871 588 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC129492.6-201ENST00000611383 1305 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC012569.1-201ENST00000591191 1524 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 AC020658.6-201ENST00000623564 1870 ntBASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms