Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 SPDYE18-201ENST00000510091 1050 ntBASIC16.27■□□□□ 0.2
SIPA1Q96FS4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 AC105020.1-201ENST00000435356 2205 ntBASIC16.27■□□□□ 0.19
SIPA1Q96FS4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.27■□□□□ 0.19
SIPA1Q96FS4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AP006294.1-201ENST00000415407 339 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 SRD5A3P1-201ENST00000603021 949 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 CHCHD2P3-201ENST00000603038 451 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AL008721.1-201ENST00000609964 604 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AC004461.2-201ENST00000629517 803 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 AL109936.8-201ENST00000641772 604 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 GGT3P-204ENST00000453783 1664 ntBASIC16.26■□□□□ 0.19
SIPA1Q96FS4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
SIPA1Q96FS4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.25■□□□□ 0.19
SIPA1Q96FS4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AC124067.4-201ENST00000519691 2379 ntBASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AC009053.2-201ENST00000563701 2365 ntBASIC16.25■□□□□ 0.19
SIPA1Q96FS4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.25■□□□□ 0.19
SIPA1Q96FS4 RN7SL752P-201ENST00000463779 287 ntBASIC16.25■□□□□ 0.19
SIPA1Q96FS4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms