Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 AC241585.1-201ENST00000433527 519 ntBASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 EEF1DP4-201ENST00000446006 880 ntBASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 AC243562.2-201ENST00000561247 970 ntBASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 AL390754.1-201ENST00000619088 582 ntBASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 AP001282.1-201ENST00000531301 1499 ntBASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 BASP1P1-201ENST00000430708 665 ntBASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 IGHV3-42-201ENST00000520410 361 ntBASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 PCDHB19P-201ENST00000570871 2371 ntBASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.19■□□□□ 0.18
ECHDC3Q96DC8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 AC004890.2-204ENST00000481968 304 ntBASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 AC093214.1-201ENST00000511688 1107 ntBASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 RNA5SP421-201ENST00000516864 134 ntBASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 SPCS2P1-201ENST00000561636 679 ntBASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms