Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC58Q96CX6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC58Q96CX6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC58Q96CX6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 FGFR3P6-201ENST00000457012 610 ntBASIC15.52■□□□□ 0.08
LRRC58Q96CX6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 FOSL1P1-201ENST00000511041 816 ntBASIC15.52■□□□□ 0.08
LRRC58Q96CX6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC58Q96CX6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
LRRC58Q96CX6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 CICP13-201ENST00000422015 2789 ntBASIC15.51■□□□□ 0.07
LRRC58Q96CX6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 UPK3BP1-201ENST00000428678 509 ntBASIC15.51■□□□□ 0.07
LRRC58Q96CX6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 RPS15P9-201ENST00000494093 319 ntBASIC15.51■□□□□ 0.07
LRRC58Q96CX6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 AC006557.2-201ENST00000592985 1240 ntBASIC15.51■□□□□ 0.07
LRRC58Q96CX6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 AC012569.1-201ENST00000591191 1524 ntBASIC15.51■□□□□ 0.07
LRRC58Q96CX6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.51■□□□□ 0.07
LRRC58Q96CX6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC58Q96CX6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms