Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAB3IL1Q8TBN0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AL592424.1-201ENST00000563624 1536 ntBASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 KRT18P1-202ENST00000452408 1331 ntBASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AF228730.7-201ENST00000641842 219 ntBASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AC092919.2-201ENST00000623631 1645 ntBASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IL1Q8TBN0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 IER3-202ENST00000376377 1350 ntBASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AC005332.1-201ENST00000577698 1310 ntBASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 TPSP2-201ENST00000561760 610 ntBASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 FAM45BP-202ENST00000592932 1624 ntBASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.29■□□□□ 0.2
RAB3IL1Q8TBN0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IL1Q8TBN0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms