Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AP001350.2-201ENST00000625104 1094 ntBASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AL139011.1-202ENST00000642063 584 ntBASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AC132872.4-202ENST00000622924 2756 ntBASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 PMS2P4-201ENST00000412466 1052 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 KLF2P3-201ENST00000451977 1087 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AL512356.2-201ENST00000546955 174 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AC051619.7-201ENST00000568314 623 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AJ011932.1-201ENST00000621707 465 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 HYMAI-201ENST00000635591 3347 ntBASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC33Q8N5R6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 PCDHA1-201ENST00000378133 2726 ntBASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 LINC01225-203ENST00000563550 1244 ntBASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 AC026150.2-201ENST00000564693 1156 ntBASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC33Q8N5R6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms