Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AL390754.1-201ENST00000619088 582 ntBASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 AC004987.2-201ENST00000395959 1148 ntBASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 AC241585.1-201ENST00000433527 519 ntBASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 AC009477.1-201ENST00000452936 217 ntBASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 AL096865.1-201ENST00000606796 927 ntBASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARHGEF39Q8N4T4 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AC087499.5-201ENST00000452760 1342 ntBASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 MIR648-201ENST00000385046 94 ntBASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 AC093214.1-201ENST00000511688 1107 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms