Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 KRT18P27-201ENST00000427733 1299 ntBASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AC136632.2-201ENST00000512891 861 ntBASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AC092119.3-201ENST00000612618 583 ntBASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AL009178.2-201ENST00000597278 2719 ntBASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 IGHV3-65-201ENST00000523210 341 ntBASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01561Q8N1V8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms