Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FAM45BP-202ENST00000592932 1624 ntBASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 AC012313.10-201ENST00000623509 926 ntBASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 CICP14-201ENST00000629111 2732 ntBASIC16.32■□□□□ 0.2
TRIM42Q8IWZ5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 AC092919.2-201ENST00000623631 1645 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 AL592424.1-201ENST00000563624 1536 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 DUSP5P1-201ENST00000441325 1139 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 AC012615.1-201ENST00000565797 1299 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 PRELID1P1-202ENST00000567272 903 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 AF228730.7-201ENST00000641842 219 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 TMBIM7P-203ENST00000641617 1718 ntBASIC16.31■□□□□ 0.2
TRIM42Q8IWZ5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 AL161772.1-201ENST00000610494 4412 ntBASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 AC104819.1-201ENST00000504587 486 ntBASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 KRT126P-201ENST00000549467 1181 ntBASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM42Q8IWZ5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms