Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC233724.13-201ENST00000598383 410 ntBASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 AC133539.2-201ENST00000604757 467 ntBASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 KRT8P22-201ENST00000562317 1415 ntBASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 RNF216P1-203ENST00000404404 2427 ntBASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS4Q8IUM7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS4Q8IUM7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 AC018665.1-201ENST00000622927 1362 ntBASIC17.27■□□□□ 0.35
NPAS4Q8IUM7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 AC106820.2-201ENST00000563775 3264 ntBASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 ANKRD19P-201ENST00000338192 862 ntBASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 CU634019.7-201ENST00000624153 1185 ntBASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 FP236241.2-201ENST00000624906 1185 ntBASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 PKD1P1-201ENST00000458669 6805 ntBASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS4Q8IUM7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AC074338.1-201ENST00000416825 156 ntBASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 TARDBPP1-201ENST00000442013 1203 ntBASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 SLC25A47P1-201ENST00000531577 414 ntBASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms