Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AC007541.1-201ENST00000570282 1469 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AL391825.1-201ENST00000457671 1364 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AC087499.6-201ENST00000411576 835 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 COX5BP8-201ENST00000416911 349 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 TP53TG3HP-202ENST00000569755 579 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AC140912.1-201ENST00000577171 1054 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AC092068.3-201ENST00000587894 2016 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AL023806.1-201ENST00000603994 1649 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PCDHB17P-201ENST00000539533 2393 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PCDHB19P-201ENST00000570871 2371 ntBASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA11Q86Y39 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 AC098614.1-201ENST00000368528 745 ntBASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 DFFBP1-201ENST00000433250 979 ntBASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA11Q86Y39 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms