Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AC138969.3-201ENST00000546612 1459 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AC138932.2-201ENST00000548268 1459 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AC126755.4-201ENST00000549796 1459 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 BNIP3P1-202ENST00000550043 1585 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 WASH4P-201ENST00000564273 1246 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AC074044.1-201ENST00000609673 707 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 PCDHA12-202ENST00000613593 2588 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.39■□□□□ 0.86
COPS6Q7L5N1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.39■□□□□ 0.86
COPS6Q7L5N1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.39■□□□□ 0.86
COPS6Q7L5N1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.39■□□□□ 0.86
COPS6Q7L5N1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COPS6Q7L5N1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 CU639417.3-201ENST00000624240 1404 ntBASIC20.39■□□□□ 0.85
COPS6Q7L5N1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 AC243562.2-201ENST00000561247 970 ntBASIC20.39■□□□□ 0.85
COPS6Q7L5N1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 AC092337.1-201ENST00000568699 1129 ntBASIC20.39■□□□□ 0.85
COPS6Q7L5N1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPS6Q7L5N1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 KRT8P37-201ENST00000451609 1420 ntBASIC20.38■□□□□ 0.85
COPS6Q7L5N1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 AC079328.2-201ENST00000561241 3354 ntBASIC20.38■□□□□ 0.85
COPS6Q7L5N1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 EEF1DP4-201ENST00000446006 880 ntBASIC20.38■□□□□ 0.85
COPS6Q7L5N1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPS6Q7L5N1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 GK-202ENST00000378941 458 ntTSL 3 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 AC055876.2-201ENST00000531834 546 ntBASIC20.37■□□□□ 0.85
COPS6Q7L5N1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms