Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL139400.1-201ENST00000366220 510 ntBASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 AC093724.1-201ENST00000448659 1027 ntBASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 RFPL4AP1-201ENST00000530883 850 ntBASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 AC026120.1-201ENST00000611536 926 ntBASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD3Q3KNS1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SPDYE11-202ENST00000450699 704 ntBASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 AC004449.1-201ENST00000564240 433 ntBASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SPDYE9P-201ENST00000570642 692 ntBASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SPDYE10P-202ENST00000612005 668 ntBASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SPDYE8P-202ENST00000612377 668 ntBASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCHD3Q3KNS1 AC073439.1-201ENST00000624121 1774 ntBASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 AL645939.2-201ENST00000427340 991 ntBASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 CYMP-203ENST00000474680 1263 ntBASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCHD3Q3KNS1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms