Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 TARDBPP1-201ENST00000442013 1203 ntBASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 WASH4P-201ENST00000564273 1246 ntBASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 LINC01115-203ENST00000606068 577 ntBASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AC093726.1-201ENST00000608064 963 ntBASIC19.32■□□□□ 0.68
PDS5AQ29RF7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.32■□□□□ 0.68
PDS5AQ29RF7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 DGCR5-201ENST00000399539 862 ntBASIC19.31■□□□□ 0.68
PDS5AQ29RF7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 TIMM17BP1-201ENST00000545713 516 ntBASIC19.31■□□□□ 0.68
PDS5AQ29RF7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 HNRNPUP1-201ENST00000554987 333 ntBASIC19.31■□□□□ 0.68
PDS5AQ29RF7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 AC007431.3-201ENST00000623221 587 ntBASIC19.31■□□□□ 0.68
PDS5AQ29RF7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDS5AQ29RF7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 PHKG1P2-201ENST00000457537 863 ntBASIC19.3■□□□□ 0.68
PDS5AQ29RF7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AC008494.3-201ENST00000606615 944 ntBASIC19.3■□□□□ 0.68
PDS5AQ29RF7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AC134407.2-201ENST00000625089 1978 ntBASIC19.3■□□□□ 0.68
PDS5AQ29RF7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.3■□□□□ 0.68
PDS5AQ29RF7 AC084018.2-201ENST00000613093 2607 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms