Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH17Q12864 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH17Q12864 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH17Q12864 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH17Q12864 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 AP005117.1-202ENST00000581724 1908 ntBASIC16.45■□□□□ 0.22
CDH17Q12864 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDH17Q12864 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH17Q12864 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH17Q12864 AKAP8P1-201ENST00000434743 1349 ntBASIC16.45■□□□□ 0.22
CDH17Q12864 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH17Q12864 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CDH17Q12864 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH17Q12864 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 AC105917.1-201ENST00000506637 2539 ntBASIC16.44■□□□□ 0.22
CDH17Q12864 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH17Q12864 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH17Q12864 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.44■□□□□ 0.22
CDH17Q12864 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH17Q12864 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.44■□□□□ 0.22
CDH17Q12864 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CDH17Q12864 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH17Q12864 MIR4321-201ENST00000592276 80 ntBASIC16.44■□□□□ 0.22
CDH17Q12864 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH17Q12864 AC091812.2-201ENST00000619081 385 ntBASIC16.44■□□□□ 0.22
CDH17Q12864 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 AC011270.2-201ENST00000624293 2550 ntBASIC16.44■□□□□ 0.22
CDH17Q12864 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH17Q12864 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH17Q12864 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH17Q12864 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH17Q12864 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.43■□□□□ 0.22
CDH17Q12864 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 AC023274.1-201ENST00000418278 595 ntBASIC16.43■□□□□ 0.22
CDH17Q12864 AC040169.1-201ENST00000565382 521 ntBASIC16.43■□□□□ 0.22
CDH17Q12864 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.43■□□□□ 0.22
CDH17Q12864 AC073389.1-201ENST00000595595 795 ntBASIC16.43■□□□□ 0.22
CDH17Q12864 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDH17Q12864 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH17Q12864 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH17Q12864 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms