Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH1Q08174 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH1Q08174 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH1Q08174 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH1Q08174 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH1Q08174 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDH1Q08174 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH1Q08174 AC105233.2-201ENST00000523697 349 ntBASIC15.71■□□□□ 0.11
PCDH1Q08174 AF228730.5-201ENST00000530288 346 ntBASIC15.71■□□□□ 0.11
PCDH1Q08174 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH1Q08174 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH1Q08174 AC084121.4-201ENST00000641598 221 ntBASIC15.71■□□□□ 0.11
PCDH1Q08174 AF228730.8-201ENST00000642140 221 ntBASIC15.71■□□□□ 0.11
PCDH1Q08174 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
PCDH1Q08174 FOXO1B-201ENST00000504678 1527 ntBASIC15.71■□□□□ 0.11
PCDH1Q08174 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDH1Q08174 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH1Q08174 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDH1Q08174 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH1Q08174 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDH1Q08174 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH1Q08174 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH1Q08174 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH1Q08174 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDH1Q08174 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDH1Q08174 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDH1Q08174 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 MIR346-201ENST00000362234 95 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH1Q08174 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDH1Q08174 TFAMP1-201ENST00000412727 736 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 GPX1P2-201ENST00000429271 606 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 AL671277.1-201ENST00000429656 993 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 MKNK2P1-201ENST00000437526 628 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 LINC01225-203ENST00000563550 1244 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 AL138918.1-201ENST00000568306 659 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDH1Q08174 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDH1Q08174 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 C20orf181-201ENST00000623918 480 ntBASIC15.7■□□□□ 0.1
PCDH1Q08174 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDH1Q08174 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH1Q08174 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH1Q08174 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 AC103702.1-201ENST00000548801 2630 ntBASIC15.69■□□□□ 0.1
PCDH1Q08174 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDH1Q08174 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 RN7SL589P-201ENST00000481268 310 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms