Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEP78395 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEP78395 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEP78395 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEP78395 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEP78395 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 AC068587.6-202ENST00000641839 5619 ntBASIC16.48■□□□□ 0.23
PRAMEP78395 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEP78395 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEP78395 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 KRT18P3-201ENST00000451602 1288 ntBASIC16.48■□□□□ 0.23
PRAMEP78395 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEP78395 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEP78395 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEP78395 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEP78395 AC140113.2-201ENST00000604370 208 ntBASIC16.48■□□□□ 0.23
PRAMEP78395 AC068137.2-201ENST00000605408 478 ntBASIC16.48■□□□□ 0.23
PRAMEP78395 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 FAM197Y3-203ENST00000618346 717 ntBASIC16.48■□□□□ 0.23
PRAMEP78395 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEP78395 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 U82695.1-201ENST00000635752 1889 ntBASIC16.48■□□□□ 0.23
PRAMEP78395 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEP78395 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEP78395 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PRAMEP78395 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 AC092474.2-201ENST00000424288 719 ntBASIC16.47■□□□□ 0.23
PRAMEP78395 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 AC074386.1-202ENST00000463561 864 ntBASIC16.47■□□□□ 0.23
PRAMEP78395 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.47■□□□□ 0.23
PRAMEP78395 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PRAMEP78395 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.47■□□□□ 0.23
PRAMEP78395 PDPK2P-202ENST00000562415 1191 ntBASIC16.47■□□□□ 0.23
PRAMEP78395 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.47■□□□□ 0.23
PRAMEP78395 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
PRAMEP78395 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEP78395 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEP78395 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEP78395 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms