Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S1P61966 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP1S1P61966 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S1P61966 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
AP1S1P61966 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 AC079328.2-201ENST00000561241 3354 ntBASIC16.35■□□□□ 0.21
AP1S1P61966 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
AP1S1P61966 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 PCDHB19P-201ENST00000570871 2371 ntBASIC16.34■□□□□ 0.21
AP1S1P61966 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AP1S1P61966 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AP1S1P61966 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AP1S1P61966 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.34■□□□□ 0.21
AP1S1P61966 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AP1S1P61966 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.34■□□□□ 0.21
AP1S1P61966 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.34■□□□□ 0.21
AP1S1P61966 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.34■□□□□ 0.21
AP1S1P61966 AC140878.1-201ENST00000565277 250 ntBASIC16.34■□□□□ 0.21
AP1S1P61966 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.34■□□□□ 0.21
AP1S1P61966 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S1P61966 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S1P61966 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP1S1P61966 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.33■□□□□ 0.21
AP1S1P61966 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S1P61966 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S1P61966 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.33■□□□□ 0.21
AP1S1P61966 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.33■□□□□ 0.21
AP1S1P61966 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S1P61966 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.33■□□□□ 0.21
AP1S1P61966 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.33■□□□□ 0.21
AP1S1P61966 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S1P61966 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S1P61966 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.33■□□□□ 0.2
AP1S1P61966 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.33■□□□□ 0.2
AP1S1P61966 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.33■□□□□ 0.2
AP1S1P61966 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S1P61966 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 AC243562.2-201ENST00000561247 970 ntBASIC16.33■□□□□ 0.2
AP1S1P61966 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
AP1S1P61966 RN7SL828P-201ENST00000607615 303 ntBASIC16.33■□□□□ 0.2
AP1S1P61966 AC106028.4-201ENST00000614509 607 ntBASIC16.33■□□□□ 0.2
AP1S1P61966 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.33■□□□□ 0.2
AP1S1P61966 AC099398.1-201ENST00000567919 2776 ntBASIC16.33■□□□□ 0.2
AP1S1P61966 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 AP001282.1-201ENST00000531301 1499 ntBASIC16.33■□□□□ 0.2
AP1S1P61966 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
AP1S1P61966 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S1P61966 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
AP1S1P61966 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S1P61966 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.33■□□□□ 0.2
AP1S1P61966 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms