Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB5BP61020 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB5BP61020 PRKY-204ENST00000533551 1019 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB5BP61020 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 AC036111.1-201ENST00000533973 1582 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 AC079776.2-201ENST00000641154 1609 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 HSPA7-201ENST00000445535 1927 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5BP61020 AC140479.7-201ENST00000636301 2332 ntBASIC12.76□□□□□ -0.37
RAB5BP61020 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5BP61020 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5BP61020 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
RAB5BP61020 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
RAB5BP61020 ZNRF2P3-201ENST00000424200 374 ntBASIC12.75□□□□□ -0.37
RAB5BP61020 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
RAB5BP61020 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB5BP61020 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB5BP61020 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.75□□□□□ -0.37
RAB5BP61020 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5BP61020 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5BP61020 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB5BP61020 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms