Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.48■□□□□ 0.07
CLDN8P56748 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 AP001005.1-201ENST00000571755 1248 ntBASIC15.48■□□□□ 0.07
CLDN8P56748 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.48■□□□□ 0.07
CLDN8P56748 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 AC073347.1-201ENST00000421633 2643 ntBASIC15.48■□□□□ 0.07
CLDN8P56748 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 AC073439.1-201ENST00000624121 1774 ntBASIC15.48■□□□□ 0.07
CLDN8P56748 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 AC011477.6-201ENST00000604980 1927 ntBASIC15.48■□□□□ 0.07
CLDN8P56748 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 AL589702.1-201ENST00000641229 1509 ntBASIC15.48■□□□□ 0.07
CLDN8P56748 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CLDN8P56748 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 MRPL3P1-201ENST00000400109 1033 ntBASIC15.47■□□□□ 0.07
CLDN8P56748 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 AL450487.1-201ENST00000426799 995 ntBASIC15.47■□□□□ 0.07
CLDN8P56748 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 AC079776.4-201ENST00000511039 504 ntBASIC15.47■□□□□ 0.07
CLDN8P56748 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.47■□□□□ 0.07
CLDN8P56748 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.47■□□□□ 0.07
CLDN8P56748 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN8P56748 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN8P56748 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.47■□□□□ 0.07
CLDN8P56748 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN8P56748 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN8P56748 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLDN8P56748 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN8P56748 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN8P56748 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN8P56748 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN8P56748 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLDN8P56748 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN8P56748 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN8P56748 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN8P56748 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDN8P56748 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN8P56748 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN8P56748 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN8P56748 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN8P56748 AC013268.4-201ENST00000637413 2228 ntBASIC15.46■□□□□ 0.07
CLDN8P56748 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms