Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CMC4P56277 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.12□□□□□ -0.47
CMC4P56277 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.12□□□□□ -0.47
CMC4P56277 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.12□□□□□ -0.47
CMC4P56277 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CMC4P56277 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.11□□□□□ -0.47
CMC4P56277 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.11□□□□□ -0.47
CMC4P56277 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.11□□□□□ -0.47
CMC4P56277 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.11□□□□□ -0.47
CMC4P56277 AC243562.2-201ENST00000561247 970 ntBASIC12.11□□□□□ -0.47
CMC4P56277 AC015911.4-201ENST00000588022 1070 ntBASIC12.11□□□□□ -0.47
CMC4P56277 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.11□□□□□ -0.47
CMC4P56277 AC003101.2-201ENST00000612557 442 ntBASIC12.11□□□□□ -0.47
CMC4P56277 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 AC138969.2-201ENST00000532739 9932 ntBASIC12.11□□□□□ -0.47
CMC4P56277 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CMC4P56277 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CMC4P56277 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CMC4P56277 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 AC080080.1-201ENST00000625121 2420 ntBASIC12.1□□□□□ -0.47
CMC4P56277 AC012313.1-201ENST00000593393 3059 ntBASIC12.1□□□□□ -0.47
CMC4P56277 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.1□□□□□ -0.47
CMC4P56277 HAUS4P1-201ENST00000406739 1145 ntBASIC12.1□□□□□ -0.47
CMC4P56277 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 AL645939.2-201ENST00000427340 991 ntBASIC12.1□□□□□ -0.47
CMC4P56277 FAM86GP-201ENST00000448322 971 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms