Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.71□□□□□ -0.05
SUMO3P55854 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.71□□□□□ -0.06
SUMO3P55854 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SUMO3P55854 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
SUMO3P55854 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
SUMO3P55854 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SUMO3P55854 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SUMO3P55854 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SUMO3P55854 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SUMO3P55854 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SUMO3P55854 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.71□□□□□ -0.06
SUMO3P55854 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
SUMO3P55854 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
SUMO3P55854 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.7□□□□□ -0.06
SUMO3P55854 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SUMO3P55854 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
SUMO3P55854 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SUMO3P55854 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.7□□□□□ -0.06
SUMO3P55854 HLA-J-203ENST00000494367 1087 ntBASIC14.7□□□□□ -0.06
SUMO3P55854 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.7□□□□□ -0.06
SUMO3P55854 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 AP001160.2-201ENST00000596071 487 ntBASIC14.7□□□□□ -0.06
SUMO3P55854 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.7□□□□□ -0.06
SUMO3P55854 AC007967.4-201ENST00000614700 386 ntBASIC14.7□□□□□ -0.06
SUMO3P55854 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.7□□□□□ -0.06
SUMO3P55854 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SUMO3P55854 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SUMO3P55854 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.7□□□□□ -0.06
SUMO3P55854 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SUMO3P55854 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 AL035456.1-201ENST00000456064 1369 ntBASIC14.7□□□□□ -0.06
SUMO3P55854 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SUMO3P55854 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.7□□□□□ -0.06
SUMO3P55854 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 AL603832.2-201ENST00000566195 2125 ntBASIC14.69□□□□□ -0.06
SUMO3P55854 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SUMO3P55854 AC011477.6-201ENST00000604980 1927 ntBASIC14.69□□□□□ -0.06
SUMO3P55854 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SUMO3P55854 AC004987.2-201ENST00000395959 1148 ntBASIC14.69□□□□□ -0.06
SUMO3P55854 TSEN15P1-201ENST00000423257 515 ntBASIC14.69□□□□□ -0.06
SUMO3P55854 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.69□□□□□ -0.06
SUMO3P55854 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.69□□□□□ -0.06
SUMO3P55854 CDC14C-201ENST00000428251 1719 ntBASIC14.69□□□□□ -0.06
SUMO3P55854 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SUMO3P55854 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.68□□□□□ -0.06
SUMO3P55854 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 AL691432.1-201ENST00000596308 1422 ntBASIC14.68□□□□□ -0.06
SUMO3P55854 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SUMO3P55854 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.68□□□□□ -0.06
SUMO3P55854 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms