Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 AC125807.1-201ENST00000483097 614 ntBASIC17.76■□□□□ 0.43
NCKAP1LP55160 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 RFPL4AP1-201ENST00000530883 850 ntBASIC17.76■□□□□ 0.43
NCKAP1LP55160 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 AP001282.1-201ENST00000531301 1499 ntBASIC17.75■□□□□ 0.43
NCKAP1LP55160 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 DOC2GP-204ENST00000639052 2548 ntBASIC17.75■□□□□ 0.43
NCKAP1LP55160 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 AC140878.1-201ENST00000565277 250 ntBASIC17.75■□□□□ 0.43
NCKAP1LP55160 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKAP1LP55160 AC069224.1-201ENST00000566372 1715 ntBASIC17.75■□□□□ 0.43
NCKAP1LP55160 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKAP1LP55160 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 AL139384.1-201ENST00000612143 3047 ntBASIC17.74■□□□□ 0.43
NCKAP1LP55160 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 AL603832.2-201ENST00000566195 2125 ntBASIC17.74■□□□□ 0.43
NCKAP1LP55160 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 SPDYE17-201ENST00000412399 783 ntBASIC17.74■□□□□ 0.43
NCKAP1LP55160 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 AC107890.1-201ENST00000422478 521 ntBASIC17.74■□□□□ 0.43
NCKAP1LP55160 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 AC243562.2-201ENST00000561247 970 ntBASIC17.74■□□□□ 0.43
NCKAP1LP55160 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKAP1LP55160 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKAP1LP55160 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKAP1LP55160 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms