Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 AC012313.1-201ENST00000593393 3059 ntBASIC22.86■■□□□ 1.25
CLTCL1P53675 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 APOA1-205ENST00000375329 927 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC22.86■■□□□ 1.25
CLTCL1P53675 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 AC012441.1-201ENST00000446669 685 ntBASIC22.86■■□□□ 1.25
CLTCL1P53675 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC22.86■■□□□ 1.25
CLTCL1P53675 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC22.86■■□□□ 1.25
CLTCL1P53675 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC22.86■■□□□ 1.25
CLTCL1P53675 AC015910.1-201ENST00000579400 975 ntBASIC22.86■■□□□ 1.25
CLTCL1P53675 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
CLTCL1P53675 KRT43P-201ENST00000434019 910 ntBASIC22.85■■□□□ 1.25
CLTCL1P53675 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC22.85■■□□□ 1.25
CLTCL1P53675 AP001889.1-201ENST00000525414 633 ntBASIC22.85■■□□□ 1.25
CLTCL1P53675 USB1-203ENST00000539737 1212 ntTSL 2 BASIC22.85■■□□□ 1.25
CLTCL1P53675 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC22.85■■□□□ 1.25
CLTCL1P53675 BTNL10-201ENST00000595971 695 ntBASIC22.85■■□□□ 1.25
CLTCL1P53675 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 AC093525.8-201ENST00000624099 1342 ntBASIC22.85■■□□□ 1.25
CLTCL1P53675 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLTCL1P53675 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.84■■□□□ 1.25
CLTCL1P53675 MGST3-203ENST00000367885 680 ntTSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC22.84■■□□□ 1.25
CLTCL1P53675 AC134915.1-201ENST00000426461 574 ntBASIC22.84■■□□□ 1.25
CLTCL1P53675 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC22.84■■□□□ 1.25
CLTCL1P53675 SLC25A47P1-201ENST00000531577 414 ntBASIC22.84■■□□□ 1.25
CLTCL1P53675 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLTCL1P53675 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CLTCL1P53675 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC22.84■■□□□ 1.25
CLTCL1P53675 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC22.83■■□□□ 1.25
CLTCL1P53675 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC22.83■■□□□ 1.25
CLTCL1P53675 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC22.83■■□□□ 1.25
CLTCL1P53675 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 C1QBPP1-201ENST00000400117 770 ntBASIC22.83■■□□□ 1.25
CLTCL1P53675 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC22.83■■□□□ 1.25
CLTCL1P53675 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC22.83■■□□□ 1.25
CLTCL1P53675 EHF-205ENST00000527935 557 ntTSL 2 BASIC22.83■■□□□ 1.25
CLTCL1P53675 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC22.83■■□□□ 1.25
CLTCL1P53675 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CLTCL1P53675 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC22.83■■□□□ 1.25
CLTCL1P53675 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms