Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 FAM86GP-201ENST00000448322 971 ntBASIC15.32■□□□□ 0.04
SMSP52788 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SMSP52788 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.32■□□□□ 0.04
SMSP52788 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 AC093512.1-201ENST00000617969 520 ntBASIC15.32■□□□□ 0.04
SMSP52788 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 AC105339.1-204ENST00000636249 355 ntBASIC15.32■□□□□ 0.04
SMSP52788 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SMSP52788 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.32■□□□□ 0.04
SMSP52788 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.32■□□□□ 0.04
SMSP52788 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMSP52788 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.32■□□□□ 0.04
SMSP52788 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.32■□□□□ 0.04
SMSP52788 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 AL035633.1-201ENST00000406139 838 ntBASIC15.31■□□□□ 0.04
SMSP52788 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.31■□□□□ 0.04
SMSP52788 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.31■□□□□ 0.04
SMSP52788 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.31■□□□□ 0.04
SMSP52788 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.31■□□□□ 0.04
SMSP52788 OR7E47P-204ENST00000575924 449 ntBASIC15.31■□□□□ 0.04
SMSP52788 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 AC239800.4-201ENST00000603712 296 ntBASIC15.31■□□□□ 0.04
SMSP52788 AC013467.2-201ENST00000605472 835 ntBASIC15.31■□□□□ 0.04
SMSP52788 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 AC092902.6-201ENST00000641783 218 ntBASIC15.31■□□□□ 0.04
SMSP52788 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.31■□□□□ 0.04
SMSP52788 AC006277.1-201ENST00000624348 1610 ntBASIC15.31■□□□□ 0.04
SMSP52788 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.31■□□□□ 0.04
SMSP52788 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.31■□□□□ 0.04
SMSP52788 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SMSP52788 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMSP52788 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SMSP52788 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 AL139400.1-201ENST00000366220 510 ntBASIC15.3■□□□□ 0.04
SMSP52788 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms