Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.15■□□□□ 0.18
ZNF140P52738 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
ZNF140P52738 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ZNF140P52738 RPS8P6-201ENST00000426177 609 ntBASIC16.15■□□□□ 0.18
ZNF140P52738 SPDYE14P-201ENST00000442619 822 ntBASIC16.15■□□□□ 0.18
ZNF140P52738 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF140P52738 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF140P52738 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.15■□□□□ 0.18
ZNF140P52738 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
ZNF140P52738 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF140P52738 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 AC027612.4-201ENST00000605371 583 ntBASIC16.15■□□□□ 0.18
ZNF140P52738 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF140P52738 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZNF140P52738 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF140P52738 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.14■□□□□ 0.18
ZNF140P52738 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ZNF140P52738 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ZNF140P52738 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF140P52738 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ZNF140P52738 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 AC134407.2-201ENST00000625089 1978 ntBASIC16.14■□□□□ 0.17
ZNF140P52738 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF140P52738 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ZNF140P52738 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZNF140P52738 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 AL691432.1-201ENST00000596308 1422 ntBASIC16.13■□□□□ 0.17
ZNF140P52738 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ZNF140P52738 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF140P52738 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms