Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PDE6CP51160 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 AC109635.5-201ENST00000533593 962 ntBASIC17.63■□□□□ 0.41
PDE6CP51160 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.63■□□□□ 0.41
PDE6CP51160 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.63■□□□□ 0.41
PDE6CP51160 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDE6CP51160 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDE6CP51160 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDE6CP51160 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDE6CP51160 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 AC092919.2-201ENST00000623631 1645 ntBASIC17.62■□□□□ 0.41
PDE6CP51160 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDE6CP51160 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.62■□□□□ 0.41
PDE6CP51160 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.62■□□□□ 0.41
PDE6CP51160 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.62■□□□□ 0.41
PDE6CP51160 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 AL009183.1-201ENST00000603760 355 ntBASIC17.62■□□□□ 0.41
PDE6CP51160 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.62■□□□□ 0.41
PDE6CP51160 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6CP51160 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PDE6CP51160 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDE6CP51160 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PDE6CP51160 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6CP51160 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
PDE6CP51160 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6CP51160 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6CP51160 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDE6CP51160 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDE6CP51160 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDE6CP51160 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6CP51160 AL355306.1-201ENST00000415580 579 ntBASIC17.61■□□□□ 0.41
PDE6CP51160 AL671277.1-201ENST00000429656 993 ntBASIC17.61■□□□□ 0.41
PDE6CP51160 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.61■□□□□ 0.41
PDE6CP51160 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.61■□□□□ 0.41
PDE6CP51160 AC027796.2-201ENST00000575326 344 ntBASIC17.61■□□□□ 0.41
PDE6CP51160 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PDE6CP51160 AC026120.1-201ENST00000611536 926 ntBASIC17.61■□□□□ 0.41
PDE6CP51160 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDE6CP51160 AKAP8P1-201ENST00000434743 1349 ntBASIC17.61■□□□□ 0.41
PDE6CP51160 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms