Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.88■□□□□ 0.45
CPT1AP50416 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
CPT1AP50416 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.88■□□□□ 0.45
CPT1AP50416 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPT1AP50416 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CPT1AP50416 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPT1AP50416 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.87■□□□□ 0.45
CPT1AP50416 AZGP1P1-201ENST00000411909 902 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPT1AP50416 AL442647.2-201ENST00000429864 857 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 KRT43P-201ENST00000434019 910 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.87■□□□□ 0.45
CPT1AP50416 RPL13P2-201ENST00000440687 659 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.87■□□□□ 0.45
CPT1AP50416 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.87■□□□□ 0.45
CPT1AP50416 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.87■□□□□ 0.45
CPT1AP50416 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.87■□□□□ 0.45
CPT1AP50416 AL391069.4-201ENST00000609583 481 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 COX11-210ENST00000639671 696 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CPT1AP50416 FZD10-202ENST00000539839 3282 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 AC078925.2-201ENST00000624013 1973 ntBASIC17.87■□□□□ 0.45
CPT1AP50416 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CPT1AP50416 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPT1AP50416 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPT1AP50416 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.87■□□□□ 0.45
CPT1AP50416 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPT1AP50416 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CPT1AP50416 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CPT1AP50416 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.86■□□□□ 0.45
CPT1AP50416 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.86■□□□□ 0.45
CPT1AP50416 AL162726.2-201ENST00000438986 1017 ntBASIC17.86■□□□□ 0.45
CPT1AP50416 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.86■□□□□ 0.45
CPT1AP50416 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.86■□□□□ 0.45
CPT1AP50416 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.86■□□□□ 0.45
CPT1AP50416 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CPT1AP50416 AC133552.6-201ENST00000613406 534 ntBASIC17.86■□□□□ 0.45
CPT1AP50416 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.86■□□□□ 0.45
CPT1AP50416 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.86■□□□□ 0.45
CPT1AP50416 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.86■□□□□ 0.45
CPT1AP50416 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 OR6D1P-203ENST00000641209 4860 ntBASIC17.86■□□□□ 0.45
CPT1AP50416 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPT1AP50416 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CPT1AP50416 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CPT1AP50416 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CPT1AP50416 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CPT1AP50416 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPT1AP50416 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms