Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CENPAP49450 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.85□□□□□ -0.03
CENPAP49450 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CENPAP49450 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 EMBP1-201ENST00000458200 901 ntBASIC14.85□□□□□ -0.03
CENPAP49450 AF186996.4-201ENST00000467186 377 ntBASIC14.85□□□□□ -0.03
CENPAP49450 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.85□□□□□ -0.03
CENPAP49450 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.85□□□□□ -0.03
CENPAP49450 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 CYP2A7P1-201ENST00000595391 815 ntBASIC14.85□□□□□ -0.03
CENPAP49450 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.85□□□□□ -0.03
CENPAP49450 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 AC005593.1-201ENST00000624894 515 ntBASIC14.85□□□□□ -0.03
CENPAP49450 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CENPAP49450 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.85□□□□□ -0.03
CENPAP49450 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 SNX33P1-201ENST00000592116 1762 ntBASIC14.85□□□□□ -0.03
CENPAP49450 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.85□□□□□ -0.03
CENPAP49450 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CENPAP49450 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 AL512652.2-201ENST00000625156 1716 ntBASIC14.84□□□□□ -0.03
CENPAP49450 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CENPAP49450 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CENPAP49450 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.84□□□□□ -0.03
CENPAP49450 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 AC087641.1-201ENST00000557561 1021 ntBASIC14.84□□□□□ -0.03
CENPAP49450 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.84□□□□□ -0.03
CENPAP49450 AC020765.3-201ENST00000613051 740 ntBASIC14.84□□□□□ -0.03
CENPAP49450 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.84□□□□□ -0.03
CENPAP49450 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CENPAP49450 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CENPAP49450 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CENPAP49450 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CENPAP49450 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CENPAP49450 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CENPAP49450 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.83□□□□□ -0.03
CENPAP49450 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms