Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC34P49427 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC34P49427 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
CDC34P49427 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 AC004817.3-201ENST00000602957 2129 ntBASIC12.92□□□□□ -0.34
CDC34P49427 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 AC092919.2-201ENST00000623631 1645 ntBASIC12.92□□□□□ -0.34
CDC34P49427 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 AC067750.1-201ENST00000608826 6545 ntBASIC12.92□□□□□ -0.34
CDC34P49427 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CDC34P49427 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 TSPY22P-201ENST00000427496 604 ntBASIC12.92□□□□□ -0.34
CDC34P49427 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 KRT18P38-201ENST00000449496 1282 ntBASIC12.92□□□□□ -0.34
CDC34P49427 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.92□□□□□ -0.34
CDC34P49427 AC139887.4-201ENST00000607877 719 ntBASIC12.92□□□□□ -0.34
CDC34P49427 AC010654.1-201ENST00000615722 808 ntBASIC12.92□□□□□ -0.34
CDC34P49427 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDC34P49427 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CDC34P49427 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC34P49427 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CDC34P49427 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.91□□□□□ -0.34
CDC34P49427 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
CDC34P49427 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 AC010203.1-204ENST00000548782 407 ntBASIC12.91□□□□□ -0.34
CDC34P49427 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.91□□□□□ -0.34
CDC34P49427 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.91□□□□□ -0.34
CDC34P49427 MIR4497-201ENST00000583208 89 ntBASIC12.91□□□□□ -0.34
CDC34P49427 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.91□□□□□ -0.34
CDC34P49427 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms