Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KRT223P-202ENST00000449164 1292 ntBASIC17.93■□□□□ 0.46
SMPD1P17405 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.93■□□□□ 0.46
SMPD1P17405 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.93■□□□□ 0.46
SMPD1P17405 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.93■□□□□ 0.46
SMPD1P17405 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.93■□□□□ 0.46
SMPD1P17405 AP005482.1-201ENST00000563722 1273 ntBASIC17.93■□□□□ 0.46
SMPD1P17405 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.93■□□□□ 0.46
SMPD1P17405 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.93■□□□□ 0.46
SMPD1P17405 AL033527.4-201ENST00000641026 673 ntBASIC17.93■□□□□ 0.46
SMPD1P17405 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.93■□□□□ 0.46
SMPD1P17405 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMPD1P17405 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMPD1P17405 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.93■□□□□ 0.46
SMPD1P17405 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMPD1P17405 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SMPD1P17405 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMPD1P17405 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMPD1P17405 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMPD1P17405 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMPD1P17405 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.92■□□□□ 0.46
SMPD1P17405 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SMPD1P17405 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.92■□□□□ 0.46
SMPD1P17405 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SMPD1P17405 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.92■□□□□ 0.46
SMPD1P17405 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.92■□□□□ 0.46
SMPD1P17405 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.92■□□□□ 0.46
SMPD1P17405 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.92■□□□□ 0.46
SMPD1P17405 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.92■□□□□ 0.46
SMPD1P17405 AC133552.6-201ENST00000613406 534 ntBASIC17.92■□□□□ 0.46
SMPD1P17405 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.92■□□□□ 0.46
SMPD1P17405 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.92■□□□□ 0.46
SMPD1P17405 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 REXO1L8P-201ENST00000604378 1897 ntBASIC17.92■□□□□ 0.46
SMPD1P17405 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 AC005052.1-201ENST00000625181 2492 ntBASIC17.92■□□□□ 0.46
SMPD1P17405 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.92■□□□□ 0.46
SMPD1P17405 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMPD1P17405 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 AC005332.8-201ENST00000622750 2735 ntBASIC17.91■□□□□ 0.46
SMPD1P17405 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SMPD1P17405 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SMPD1P17405 AL442647.2-201ENST00000429864 857 ntBASIC17.91■□□□□ 0.46
SMPD1P17405 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.91■□□□□ 0.46
SMPD1P17405 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.91■□□□□ 0.46
SMPD1P17405 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.91■□□□□ 0.46
SMPD1P17405 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.91■□□□□ 0.46
SMPD1P17405 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMPD1P17405 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.91■□□□□ 0.46
SMPD1P17405 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.91■□□□□ 0.46
SMPD1P17405 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.91■□□□□ 0.46
SMPD1P17405 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
SMPD1P17405 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
SMPD1P17405 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SMPD1P17405 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMPD1P17405 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.9■□□□□ 0.46
SMPD1P17405 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMPD1P17405 KRT8P22-201ENST00000562317 1415 ntBASIC17.9■□□□□ 0.46
SMPD1P17405 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMPD1P17405 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMPD1P17405 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.9■□□□□ 0.46
SMPD1P17405 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms