Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 AP003680.1-201ENST00000598970 3660 ntBASIC14.46□□□□□ -0.09
CTLA4P16410 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CTLA4P16410 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.46□□□□□ -0.09
CTLA4P16410 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CTLA4P16410 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
CTLA4P16410 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CTLA4P16410 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.46□□□□□ -0.09
CTLA4P16410 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 MED15P5-201ENST00000423150 992 ntBASIC14.46□□□□□ -0.09
CTLA4P16410 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.46□□□□□ -0.09
CTLA4P16410 RNA5SP416-201ENST00000516838 111 ntBASIC14.46□□□□□ -0.09
CTLA4P16410 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.46□□□□□ -0.09
CTLA4P16410 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.46□□□□□ -0.09
CTLA4P16410 AC106730.1-201ENST00000566722 1090 ntBASIC14.46□□□□□ -0.09
CTLA4P16410 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.46□□□□□ -0.09
CTLA4P16410 AC027601.4-201ENST00000611259 610 ntBASIC14.46□□□□□ -0.09
CTLA4P16410 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CTLA4P16410 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTLA4P16410 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.46□□□□□ -0.1
CTLA4P16410 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CTLA4P16410 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.46□□□□□ -0.1
CTLA4P16410 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 AL589702.1-201ENST00000641229 1509 ntBASIC14.46□□□□□ -0.1
CTLA4P16410 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CTLA4P16410 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.46□□□□□ -0.1
CTLA4P16410 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTLA4P16410 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.46□□□□□ -0.1
CTLA4P16410 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CTLA4P16410 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.45□□□□□ -0.1
CTLA4P16410 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 HYMAI-201ENST00000635591 3347 ntBASIC14.45□□□□□ -0.1
CTLA4P16410 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CTLA4P16410 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.45□□□□□ -0.1
CTLA4P16410 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 AC002056.1-201ENST00000395613 760 ntBASIC14.45□□□□□ -0.1
CTLA4P16410 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.45□□□□□ -0.1
CTLA4P16410 AL591424.1-201ENST00000442569 1213 ntBASIC14.45□□□□□ -0.1
CTLA4P16410 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 KRT18P3-201ENST00000451602 1288 ntBASIC14.45□□□□□ -0.1
CTLA4P16410 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 PRYP6-201ENST00000514804 343 ntBASIC14.45□□□□□ -0.1
CTLA4P16410 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.45□□□□□ -0.1
CTLA4P16410 AC099522.2-201ENST00000607001 744 ntBASIC14.45□□□□□ -0.1
CTLA4P16410 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CTLA4P16410 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.45□□□□□ -0.1
CTLA4P16410 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.45□□□□□ -0.1
CTLA4P16410 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CTLA4P16410 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.45□□□□□ -0.1
CTLA4P16410 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTLA4P16410 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CTLA4P16410 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.44□□□□□ -0.1
CTLA4P16410 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.44□□□□□ -0.1
CTLA4P16410 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms