Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
HOXC6P09630 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.22■□□□□ 0.51
HOXC6P09630 AL162726.2-201ENST00000438986 1017 ntBASIC18.22■□□□□ 0.51
HOXC6P09630 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.22■□□□□ 0.51
HOXC6P09630 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.22■□□□□ 0.51
HOXC6P09630 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 AL583810.1-201ENST00000553344 1045 ntBASIC18.22■□□□□ 0.51
HOXC6P09630 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.22■□□□□ 0.51
HOXC6P09630 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.22■□□□□ 0.51
HOXC6P09630 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 AL603756.1-201ENST00000606511 2163 ntBASIC18.22■□□□□ 0.51
HOXC6P09630 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC6P09630 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC6P09630 KRT8P22-201ENST00000562317 1415 ntBASIC18.22■□□□□ 0.51
HOXC6P09630 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC6P09630 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HOXC6P09630 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HOXC6P09630 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HOXC6P09630 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HOXC6P09630 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC6P09630 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.21■□□□□ 0.51
HOXC6P09630 AC004987.2-201ENST00000395959 1148 ntBASIC18.21■□□□□ 0.51
HOXC6P09630 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
HOXC6P09630 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.21■□□□□ 0.51
HOXC6P09630 FAM8A2P-201ENST00000528813 1142 ntBASIC18.21■□□□□ 0.51
HOXC6P09630 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.21■□□□□ 0.51
HOXC6P09630 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.21■□□□□ 0.51
HOXC6P09630 MIR5189-201ENST00000577370 114 ntBASIC18.21■□□□□ 0.51
HOXC6P09630 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.21■□□□□ 0.51
HOXC6P09630 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HOXC6P09630 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.21■□□□□ 0.51
HOXC6P09630 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC6P09630 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HOXC6P09630 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HOXC6P09630 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC6P09630 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HOXC6P09630 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
HOXC6P09630 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HOXC6P09630 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC6P09630 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC6P09630 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HOXC6P09630 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HOXC6P09630 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 PDIA3P1-201ENST00000471856 1510 ntBASIC18.2■□□□□ 0.5
HOXC6P09630 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HOXC6P09630 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC6P09630 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC6P09630 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HOXC6P09630 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.2■□□□□ 0.5
HOXC6P09630 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.2■□□□□ 0.5
HOXC6P09630 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 BRI3BPP1-201ENST00000594224 787 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms