Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PDGFAP04085 SLC25A1P3-201ENST00000395415 828 ntBASIC15.28■□□□□ 0.04
PDGFAP04085 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.28■□□□□ 0.04
PDGFAP04085 AC105233.2-201ENST00000523697 349 ntBASIC15.28■□□□□ 0.04
PDGFAP04085 AF228730.5-201ENST00000530288 346 ntBASIC15.28■□□□□ 0.04
PDGFAP04085 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.28■□□□□ 0.04
PDGFAP04085 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.28■□□□□ 0.04
PDGFAP04085 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 AL359881.2-201ENST00000602973 570 ntBASIC15.28■□□□□ 0.04
PDGFAP04085 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.28■□□□□ 0.04
PDGFAP04085 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 AC133963.1-201ENST00000504166 1679 ntBASIC15.28■□□□□ 0.04
PDGFAP04085 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFAP04085 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
PDGFAP04085 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PDGFAP04085 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.27■□□□□ 0.04
PDGFAP04085 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDGFAP04085 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.27■□□□□ 0.04
PDGFAP04085 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.27■□□□□ 0.04
PDGFAP04085 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFAP04085 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFAP04085 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.27■□□□□ 0.04
PDGFAP04085 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFAP04085 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFAP04085 AC009407.1-201ENST00000568958 598 ntBASIC15.27■□□□□ 0.04
PDGFAP04085 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 AC008738.7-201ENST00000609744 511 ntBASIC15.27■□□□□ 0.04
PDGFAP04085 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFAP04085 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFAP04085 AP001350.2-201ENST00000625104 1094 ntBASIC15.27■□□□□ 0.04
PDGFAP04085 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.27■□□□□ 0.04
PDGFAP04085 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.27■□□□□ 0.03
PDGFAP04085 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.27■□□□□ 0.03
PDGFAP04085 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 LINC00895-201ENST00000629028 1637 ntBASIC15.27■□□□□ 0.03
PDGFAP04085 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PDGFAP04085 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PDGFAP04085 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PDGFAP04085 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFAP04085 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDGFAP04085 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PDGFAP04085 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDGFAP04085 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PDGFAP04085 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms