Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPTM1O96005 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.45■□□□□ 0.06
CLPTM1O96005 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.45■□□□□ 0.06
CLPTM1O96005 CICP23-201ENST00000605013 2741 ntBASIC15.45■□□□□ 0.06
CLPTM1O96005 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.45■□□□□ 0.06
CLPTM1O96005 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 TMBIM7P-203ENST00000641617 1718 ntBASIC15.45■□□□□ 0.06
CLPTM1O96005 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPTM1O96005 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.45■□□□□ 0.06
CLPTM1O96005 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPTM1O96005 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLPTM1O96005 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPTM1O96005 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.45■□□□□ 0.06
CLPTM1O96005 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPTM1O96005 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.44■□□□□ 0.06
CLPTM1O96005 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CLPTM1O96005 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CLPTM1O96005 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.44■□□□□ 0.06
CLPTM1O96005 DRAXINP1-201ENST00000437611 948 ntBASIC15.44■□□□□ 0.06
CLPTM1O96005 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLPTM1O96005 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 AP000867.3-201ENST00000524675 377 ntBASIC15.44■□□□□ 0.06
CLPTM1O96005 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPTM1O96005 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPTM1O96005 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 AC009154.2-201ENST00000621177 724 ntBASIC15.44■□□□□ 0.06
CLPTM1O96005 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPTM1O96005 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPTM1O96005 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPTM1O96005 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPTM1O96005 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPTM1O96005 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPTM1O96005 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPTM1O96005 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 AL845331.1-201ENST00000424978 1190 ntBASIC15.43■□□□□ 0.06
CLPTM1O96005 AC091607.1-201ENST00000490318 1060 ntBASIC15.43■□□□□ 0.06
CLPTM1O96005 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.43■□□□□ 0.06
CLPTM1O96005 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.43■□□□□ 0.06
CLPTM1O96005 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.43■□□□□ 0.06
CLPTM1O96005 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 AC097637.2-201ENST00000624096 1997 ntBASIC15.43■□□□□ 0.06
CLPTM1O96005 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms