Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTNND1O60716 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTNND1O60716 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTNND1O60716 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CTNND1O60716 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.89■□□□□ 0.62
CTNND1O60716 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.89■□□□□ 0.62
CTNND1O60716 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.89■□□□□ 0.62
CTNND1O60716 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CTNND1O60716 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CTNND1O60716 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CTNND1O60716 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CTNND1O60716 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.89■□□□□ 0.61
CTNND1O60716 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNND1O60716 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.89■□□□□ 0.61
CTNND1O60716 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 MIR658-201ENST00000385210 100 ntBASIC18.89■□□□□ 0.61
CTNND1O60716 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.89■□□□□ 0.61
CTNND1O60716 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.89■□□□□ 0.61
CTNND1O60716 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNND1O60716 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNND1O60716 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNND1O60716 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
CTNND1O60716 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.89■□□□□ 0.61
CTNND1O60716 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNND1O60716 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.89■□□□□ 0.61
CTNND1O60716 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.88■□□□□ 0.61
CTNND1O60716 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.88■□□□□ 0.61
CTNND1O60716 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CTNND1O60716 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.88■□□□□ 0.61
CTNND1O60716 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTNND1O60716 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 AC105020.1-201ENST00000435356 2205 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.88■□□□□ 0.61
CTNND1O60716 AC080080.1-201ENST00000625121 2420 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CTNND1O60716 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 AC004987.2-201ENST00000395959 1148 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.88■□□□□ 0.61
CTNND1O60716 AC104596.2-201ENST00000512793 793 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.88■□□□□ 0.61
CTNND1O60716 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.88■□□□□ 0.61
CTNND1O60716 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.88■□□□□ 0.61
CTNND1O60716 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.88■□□□□ 0.61
CTNND1O60716 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CTNND1O60716 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.88■□□□□ 0.61
CTNND1O60716 AL512343.1-201ENST00000605837 169 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 MIR8072-201ENST00000614241 80 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.88■□□□□ 0.61
CTNND1O60716 AL033527.5-201ENST00000641382 801 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 AC084018.2-201ENST00000613093 2607 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 AL691432.1-201ENST00000596308 1422 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CTNND1O60716 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTNND1O60716 PKD1P1-201ENST00000458669 6805 ntBASIC18.88■□□□□ 0.61
CTNND1O60716 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CTNND1O60716 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNND1O60716 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.88■□□□□ 0.61
CTNND1O60716 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CTNND1O60716 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 CDC14C-201ENST00000428251 1719 ntBASIC18.87■□□□□ 0.61
CTNND1O60716 TNRC18P3-201ENST00000441896 2691 ntBASIC18.87■□□□□ 0.61
CTNND1O60716 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.87■□□□□ 0.61
CTNND1O60716 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.87■□□□□ 0.61
CTNND1O60716 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms