Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
PDE6DO43924 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
PDE6DO43924 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 AL359075.1-203ENST00000462729 1002 ntBASIC12.67□□□□□ -0.38
PDE6DO43924 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.67□□□□□ -0.38
PDE6DO43924 AC020765.3-201ENST00000613051 740 ntBASIC12.67□□□□□ -0.38
PDE6DO43924 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 CICP4-201ENST00000447359 2812 ntBASIC12.67□□□□□ -0.38
PDE6DO43924 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
PDE6DO43924 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 AC104581.4-201ENST00000623126 3052 ntBASIC12.67□□□□□ -0.38
PDE6DO43924 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.67□□□□□ -0.38
PDE6DO43924 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.67□□□□□ -0.38
PDE6DO43924 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PDE6DO43924 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PDE6DO43924 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.66□□□□□ -0.38
PDE6DO43924 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
PDE6DO43924 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms