Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYRM1O43325 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.04□□□□□ -0.16
LYRM1O43325 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LYRM1O43325 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 INGX-201ENST00000359239 846 ntBASIC14.03□□□□□ -0.16
LYRM1O43325 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.03□□□□□ -0.16
LYRM1O43325 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 FITM1-202ENST00000559294 800 ntBASIC14.03□□□□□ -0.16
LYRM1O43325 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.03□□□□□ -0.16
LYRM1O43325 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.03□□□□□ -0.16
LYRM1O43325 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.03□□□□□ -0.16
LYRM1O43325 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 AC026471.5-201ENST00000615068 467 ntBASIC14.03□□□□□ -0.16
LYRM1O43325 AC113410.3-201ENST00000623366 203 ntBASIC14.03□□□□□ -0.16
LYRM1O43325 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.03□□□□□ -0.16
LYRM1O43325 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.03□□□□□ -0.16
LYRM1O43325 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.03□□□□□ -0.16
LYRM1O43325 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LYRM1O43325 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 C18orf15-201ENST00000623680 2534 ntBASIC14.03□□□□□ -0.16
LYRM1O43325 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYRM1O43325 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.03□□□□□ -0.16
LYRM1O43325 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYRM1O43325 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LYRM1O43325 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.02□□□□□ -0.16
LYRM1O43325 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYRM1O43325 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.02□□□□□ -0.16
LYRM1O43325 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.16
LYRM1O43325 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYRM1O43325 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYRM1O43325 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYRM1O43325 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.02□□□□□ -0.16
LYRM1O43325 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYRM1O43325 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LYRM1O43325 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.02□□□□□ -0.17
LYRM1O43325 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.02□□□□□ -0.17
LYRM1O43325 NUS1P1-201ENST00000446295 882 ntBASIC14.02□□□□□ -0.17
LYRM1O43325 RBM17P1-201ENST00000453646 1190 ntBASIC14.02□□□□□ -0.17
LYRM1O43325 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 AC128688.1-201ENST00000487626 519 ntBASIC14.02□□□□□ -0.17
LYRM1O43325 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.02□□□□□ -0.17
LYRM1O43325 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 GCSHP2-201ENST00000560971 527 ntBASIC14.02□□□□□ -0.17
LYRM1O43325 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LYRM1O43325 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.02□□□□□ -0.17
LYRM1O43325 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.02□□□□□ -0.17
LYRM1O43325 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.02□□□□□ -0.17
LYRM1O43325 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.02□□□□□ -0.17
LYRM1O43325 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYRM1O43325 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms