Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXN3O00409 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXN3O00409 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 GPX1P2-201ENST00000429271 606 ntBASIC17.42■□□□□ 0.38
FOXN3O00409 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 ADH5P3-201ENST00000433842 1137 ntBASIC17.42■□□□□ 0.38
FOXN3O00409 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 AC243562.1-201ENST00000560672 389 ntBASIC17.42■□□□□ 0.38
FOXN3O00409 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXN3O00409 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 MIR4321-201ENST00000592276 80 ntBASIC17.42■□□□□ 0.38
FOXN3O00409 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXN3O00409 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FOXN3O00409 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
FOXN3O00409 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXN3O00409 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
FOXN3O00409 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 HAUS4P1-201ENST00000406739 1145 ntBASIC17.41■□□□□ 0.38
FOXN3O00409 AC004832.2-201ENST00000426397 482 ntBASIC17.41■□□□□ 0.38
FOXN3O00409 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
FOXN3O00409 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
FOXN3O00409 AC027307.2-201ENST00000591252 911 ntBASIC17.41■□□□□ 0.38
FOXN3O00409 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 SPTSSB-204ENST00000617024 1292 ntBASIC17.41■□□□□ 0.38
FOXN3O00409 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXN3O00409 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
FOXN3O00409 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
FOXN3O00409 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
FOXN3O00409 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXN3O00409 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXN3O00409 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXN3O00409 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXN3O00409 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.4■□□□□ 0.38
FOXN3O00409 AC098859.1-201ENST00000502915 1238 ntBASIC17.4■□□□□ 0.38
FOXN3O00409 KRT8P48-201ENST00000515599 1220 ntBASIC17.4■□□□□ 0.38
FOXN3O00409 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXN3O00409 AC008267.7-201ENST00000624570 1194 ntBASIC17.4■□□□□ 0.38
FOXN3O00409 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXN3O00409 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXN3O00409 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms