Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 REXO1L8P-201ENST00000604378 1897 ntBASIC15.59■□□□□ 0.09
PDLIM1O00151 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC006277.1-201ENST00000624348 1610 ntBASIC15.59■□□□□ 0.09
PDLIM1O00151 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.59■□□□□ 0.09
PDLIM1O00151 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.59■□□□□ 0.09
PDLIM1O00151 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM1O00151 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM1O00151 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC015656.1-201ENST00000624209 3578 ntBASIC15.59■□□□□ 0.09
PDLIM1O00151 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.59■□□□□ 0.09
PDLIM1O00151 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM1O00151 CDC14C-201ENST00000428251 1719 ntBASIC15.59■□□□□ 0.09
PDLIM1O00151 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 LINC02447-202ENST00000501888 2146 ntBASIC15.59■□□□□ 0.09
PDLIM1O00151 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC002310.6-201ENST00000624451 1377 ntBASIC15.59■□□□□ 0.09
PDLIM1O00151 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM1O00151 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDLIM1O00151 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.59■□□□□ 0.09
PDLIM1O00151 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.58■□□□□ 0.09
PDLIM1O00151 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PDLIM1O00151 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PDLIM1O00151 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM1O00151 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 AC063926.3-201ENST00000624734 5658 ntBASIC15.58■□□□□ 0.08
PDLIM1O00151 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 AKR1C7P-201ENST00000305623 895 ntBASIC15.58■□□□□ 0.08
PDLIM1O00151 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.58■□□□□ 0.08
PDLIM1O00151 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.58■□□□□ 0.08
PDLIM1O00151 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.58■□□□□ 0.08
PDLIM1O00151 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.58■□□□□ 0.08
PDLIM1O00151 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.58■□□□□ 0.08
PDLIM1O00151 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 REXO1L6P-202ENST00000619970 1078 ntBASIC15.58■□□□□ 0.08
PDLIM1O00151 AL691432.3-201ENST00000621860 400 ntBASIC15.58■□□□□ 0.08
PDLIM1O00151 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 AC139749.1-202ENST00000617529 3139 ntBASIC15.58■□□□□ 0.08
PDLIM1O00151 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM1O00151 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 CICP24-201ENST00000605464 2705 ntBASIC15.58■□□□□ 0.08
PDLIM1O00151 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM1O00151 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM1O00151 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms