Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 ME2P1-201ENST00000426028 1970 ntBASIC17.73■□□□□ 0.43
CCDC66A2RUB6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
CCDC66A2RUB6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 AL591684.3-201ENST00000605187 298 ntBASIC17.73■□□□□ 0.43
CCDC66A2RUB6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.73■□□□□ 0.43
CCDC66A2RUB6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC66A2RUB6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 NCF1C-201ENST00000438382 1427 ntBASIC17.72■□□□□ 0.43
CCDC66A2RUB6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 KRT16P4-201ENST00000453883 522 ntBASIC17.72■□□□□ 0.43
CCDC66A2RUB6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 AC093458.2-201ENST00000623150 629 ntBASIC17.72■□□□□ 0.43
CCDC66A2RUB6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC66A2RUB6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.72■□□□□ 0.43
CCDC66A2RUB6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 MTHFR-217ENST00000641820 1569 ntBASIC17.71■□□□□ 0.43
CCDC66A2RUB6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC66A2RUB6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms