Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AC245100.3-201ENST00000441281 285 ntBASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AJ011932.1-201ENST00000621707 465 ntBASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 GPS2P2-201ENST00000430745 888 ntBASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 RBPMS2P1-201ENST00000437762 623 ntBASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 AP3S2-216ENST00000617003 1561 ntBASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAI2Q9Y5P3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 FAM220BP-201ENST00000377689 816 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 HLA-H-201ENST00000383620 1096 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AC022494.1-201ENST00000466044 728 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AC093214.1-201ENST00000511688 1107 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 RNA5SP410-201ENST00000516285 106 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 RNA5SP421-201ENST00000516864 134 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 DUX4L27-201ENST00000554796 1261 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 AC005225.4-201ENST00000557330 545 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 LINC00628-201ENST00000628516 1289 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms