Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC012645.4-201ENST00000610691 1061 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AP001059.3-201ENST00000619053 235 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 AC005622.1-201ENST00000636801 1703 ntBASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB1Q9Y5F3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 FO538757.1-201ENST00000623083 1397 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 AC026691.1-201ENST00000602502 2017 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 AC107890.1-201ENST00000422478 521 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB1Q9Y5F3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 WASH6P-202ENST00000359512 1437 ntBASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 TREML5P-201ENST00000421694 576 ntBASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 SPCS2P4-201ENST00000436160 681 ntBASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AC016027.1-202ENST00000607927 1699 ntBASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 AL391005.1-201ENST00000623953 2435 ntBASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms