Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB4Q9UN71 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 CICP13-201ENST00000422015 2789 ntBASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB4Q9UN71 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 TSPY19P-201ENST00000418461 509 ntBASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 TSPY18P-201ENST00000441642 509 ntBASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 FGFR3P6-201ENST00000457012 610 ntBASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 SART3-203ENST00000546611 1184 ntBASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB4Q9UN71 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AC022532.1-201ENST00000624563 1728 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AL596087.1-201ENST00000400979 1969 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms