Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 U82695.1-201ENST00000635752 1889 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SPTLC1P1-201ENST00000447199 261 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC009477.1-201ENST00000452936 217 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC010336.2-201ENST00000564226 506 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC239800.4-201ENST00000603712 296 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 RNA5-8SN1-201ENST00000610460 153 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 RNA5-8SN5-202ENST00000612463 153 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 RNA5-8SN4-201ENST00000613359 153 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 RNA5-8SN5-201ENST00000619471 153 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AL109936.8-201ENST00000641772 604 ntBASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms