Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
CSMD1Q96PZ7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC069218.1-201ENST00000435269 762 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC008267.1-201ENST00000474858 1069 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 FTLP10-202ENST00000505798 471 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 FGFR3P5-201ENST00000564496 886 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AL139327.4-201ENST00000612362 153 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AL136982.4-201ENST00000437689 1740 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 KRT18P55-202ENST00000578578 1546 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RNA5SP410-201ENST00000516285 106 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AP001350.2-201ENST00000625104 1094 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 CNN2P8-201ENST00000421872 913 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 MIR3907-201ENST00000579424 151 ntBASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD1Q96PZ7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 FRMD8P1-201ENST00000440433 1524 ntBASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AC079316.1-201ENST00000548397 411 ntBASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 RN7SL399P-201ENST00000471648 279 ntBASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 AL359711.2-201ENST00000563105 872 ntBASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 HLA-C-210ENST00000640219 976 ntBASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms