Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXRED1Q96CU9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXRED1Q96CU9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 EMBP1-201ENST00000458200 901 ntBASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 AC004706.3-202ENST00000621574 984 ntBASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 AL355877.3-201ENST00000622820 899 ntBASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXRED1Q96CU9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AKR1C7P-201ENST00000305623 895 ntBASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 PMS2P1-201ENST00000431037 1228 ntBASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AL592424.1-201ENST00000563624 1536 ntBASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms