Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 MIR943-201ENST00000401286 94 ntBASIC16.15■□□□□ 0.18
SCAMP4Q969E2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 AC140878.1-201ENST00000565277 250 ntBASIC16.15■□□□□ 0.18
SCAMP4Q969E2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 AC105021.1-202ENST00000570572 669 ntBASIC16.15■□□□□ 0.18
SCAMP4Q969E2 MIR4321-201ENST00000592276 80 ntBASIC16.15■□□□□ 0.18
SCAMP4Q969E2 AL365330.1-201ENST00000607459 531 ntBASIC16.15■□□□□ 0.18
SCAMP4Q969E2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 AC006449.5-201ENST00000610658 2098 ntBASIC16.15■□□□□ 0.18
SCAMP4Q969E2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SCAMP4Q969E2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
SCAMP4Q969E2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
SCAMP4Q969E2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 TREML5P-201ENST00000421694 576 ntBASIC16.14■□□□□ 0.17
SCAMP4Q969E2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 AC005498.2-205ENST00000593218 784 ntBASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 AL390955.2-201ENST00000603032 514 ntBASIC16.14■□□□□ 0.17
SCAMP4Q969E2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCAMP4Q969E2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 FO538757.1-201ENST00000623083 1397 ntBASIC16.13■□□□□ 0.17
SCAMP4Q969E2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCAMP4Q969E2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms